PeerLibrary

Facilitating the global conversation on academic literature.

https://peerlibrary.org/ | http://blog.peerlibrary.org/ | @PeerLibrary | Facebook

• GitHub
• Development wiki
• Development tickets
• Development mailing list
• IRC at #peerlibrary @ Freenode
• Email hello @ peerlibrary.org

PeerLibrary outreach is done in another repository.

Weekly meeting

Regular general weekly meeting is ~~every Wednesday 5 PM PST~~ (temporary on hiatus). Meeting is open to really everyone. Remote participation is possible using Google Hangout through permanently opened video session. Additionally, join us on our IRC channel at that time for more information. We are also using our IRC channel for a backchannel to the meeting. Notes are taken and sent to the mailing lists, and their address follow the following format

http://pad.peerlibrary.org/p/meeting-YYYY-MM-DD

Development installation

PeerLibrary is built upon the Meteor platform. You can install it with:

curl http://meteor.peerlibrary.org/ | sh

Meteor provides node.js (if you have it installed already you can use the one provided on your system). To add it into your environment, add

~/.meteor/tools/latest/bin

PATH

export PATH=~/.meteor/tools/latest/bin:$PATH

To add tools to your shell permanently, run:

echo 'export PATH=~/.meteor/tools/latest/bin:$PATH' >> ~/.bash_profile

Maybe on your system you have to add the line to

~/.profile

PeerLibrary requires additional Meteor packages which are provided through Meteorite, a Meteor package manager. Install it as well:

npm install -g meteorite

Other requirements to run PeerLibrary

On first run, PeerLibrary compiles and locally installs additional Meteor packages, some of them have non-Meteor dependencies. The following libraries have to be available on your system for PeerLibrary to successfully run:

• Cairo graphic library
• FreeType
• Pango
• pkg-config
• giflib
• libjpeg

On Mac OS X you can get Cairo by installing X11 (Pango and FreeType are already available on the system) and run the following before you run

mrt

export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig

To be able to compile Meteor packages, you need Xcode with command line tools installed (from Preferences > Downloads > Components).

You can install

pkg-config

giflib

libjpeg

brew install pkg-config giflib libjpeg

On Debian you can install all dependencies by:

sudo aptitude install libcairo2-dev libfreetype6-dev libjpeg8-dev libpango1.0-dev libgif-dev build-essential g++

Run it!

Recursively clone a PeerLibrary repository:

git clone --recursive https://github.com/peerlibrary/peerlibrary.git

This will give you the latest development version of PeerLibrary (

development

master

And then run a development instance of PeerLibrary:

mrt

And open http://localhost:3000/, which is an address of your local development instance, to start an installation wizard process in which you create an admin user (which has username

admin

To demo the tool, you will need to populate your instance of the database with publications. Log in as

admin

For more information on configuring your installation, see settings.

ArXiv publications

To load and use arXiv publications, open Admin dashboard (http://localhost:3000/admin) and click on Sync arXiv metadata button first and after it loads all the metadata, click Sync arXiv PDF cache button to load all PDFs. After the caching finishes and PDFs are processed you will be able to search and open arXiv publications in PeerLibrary.

arXiv is a huge repository and loading all the publications takes a lot of space (few 100 GBs) and time. You probably do not want to do this. It consumes arXiv resources and costs you money. Use Initialize database with sample data to get a small sample of arXiv publications.

You will need AWS

accessKeyId

secretAccessKey

settings.json

Free Speech Movement publications

To load and use Free Speech Movement publications, open Admin dashboard (http://localhost:3000/admin) and click on Sync FSM metadata button first and after it loads all the metadata, click Sync FSM cache button to load all the TEI textual documents. After the caching finishes you will be able to search and open FSM publications in PeerLibrary.

You will need FSM API

appId

appKey

settings.json

Troubleshooting

If you are using Mac OS X and are worried that you may have forgotten some dependencies then run the script

checkdependencies.sh

Sometimes when installing dependencies, Meteor will throw the following error:

npm ERR! cb() never called!
npm ERR! not ok code 0

This just means that there was a timeout while downloading a dependency, probably because of a networking issue. Just retry.

If you have not cloned recursively (if you forgot

--recursive

git clone --recursive https://github.com/peerlibrary/peerlibrary.git

While building package `blob`:
error: File not found: Blob/Blob.js

Or similar errors for other packages, you just have to manually initialize git submodules we are using:

git submodule update --init --recursive

If you are getting an error like:

Error: Cannot find module '../build/Release/canvas'

Then there is an issue compiling the node-canvas dependency. Check if you have all required non-Meteor dependencies installed and retry by removing the whole

meteor-pdf.js

mrt

rm -rf ~/.meteorite/packages/pdf.js/

If you are getting an error like:

Error: Could not locate the bindings file.

Then you upgraded your system and the package which was previously compiled now does not work anymore. You have to force recompilation by, for example, removing the package. Example for

segfault-handler

rm -rf ~/.meteorite/packages/segfault-handler/

If you are getting Stylus errors like:

error: Stylus compiler error: client/css/_viewer.styl:2

failed to locate @import file variables.styl

You are not running

mrt

If you notice that

mrt

npm install -g meteorite

Contributing

PeerLibrary is currently in active development where we are creating basic architecture. Major code refactoring and rewrites are thus common. Nevertheless, you are invited to join the development, but please understand that things might be changing under your feet so it is probably useful to discuss planned contributions in advance.

See the CONTRIBUTING file for more details and ideas.

You can also help with PeerLibrary outreach, promotion, teaching, and community organizing.